Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 AL162430.1-201ENST00000480705 870 ntBASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 MYCNOS-205ENST00000641950 531 ntBASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHGC3Q9UN70 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PCDHGC3Q9UN70 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 AC121338.2-201ENST00000622535 1744 ntBASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 RBM17P2-201ENST00000616397 1405 ntBASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 PLK5-205ENST00000642079 1969 ntBASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGC3Q9UN70 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGC3Q9UN70 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 KRT18P11-201ENST00000435214 1283 ntBASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGC3Q9UN70 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 AC011484.1-201ENST00000377652 1995 ntBASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 AC137761.2-201ENST00000561729 223 ntBASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 AC145350.3-201ENST00000569033 163 ntBASIC21.98■■□□□ 1.11
PCDHGC3Q9UN70 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms