Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC33.82■■■■□ 3
RIMBP3Q9UFD9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC33.82■■■■□ 3
RIMBP3Q9UFD9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
RIMBP3Q9UFD9 AC135731.1-201ENST00000569415 2548 ntBASIC33.81■■■■□ 3
RIMBP3Q9UFD9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC33.81■■■■□ 3
RIMBP3Q9UFD9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC33.81■■■■□ 3
RIMBP3Q9UFD9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC33.81■■■■□ 3
RIMBP3Q9UFD9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC33.81■■■■□ 3
RIMBP3Q9UFD9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC33.81■■■■□ 3
RIMBP3Q9UFD9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC33.81■■■■□ 3
RIMBP3Q9UFD9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC33.81■■■■□ 3
RIMBP3Q9UFD9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC33.81■■■■□ 3
RIMBP3Q9UFD9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
RIMBP3Q9UFD9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
RIMBP3Q9UFD9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC33.8■■■■□ 3
RIMBP3Q9UFD9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC33.8■■■■□ 3
RIMBP3Q9UFD9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
RIMBP3Q9UFD9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
RIMBP3Q9UFD9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
RIMBP3Q9UFD9 AC145676.1-201ENST00000514988 2004 ntBASIC33.8■■■■□ 3
RIMBP3Q9UFD9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
RIMBP3Q9UFD9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC33.79■■■■□ 3
RIMBP3Q9UFD9 HES2-206ENST00000489730 730 ntTSL 2 BASIC33.79■■■■□ 3
RIMBP3Q9UFD9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC33.79■■■■□ 3
RIMBP3Q9UFD9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC33.79■■■■□ 3
RIMBP3Q9UFD9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC33.79■■■■□ 3
RIMBP3Q9UFD9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC33.79■■■■□ 3
RIMBP3Q9UFD9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC33.79■■■■□ 3
RIMBP3Q9UFD9 NUDT16P1-203ENST00000513809 620 ntBASIC33.79■■■■□ 3
RIMBP3Q9UFD9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC33.79■■■■□ 3
RIMBP3Q9UFD9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC33.79■■■■□ 3
RIMBP3Q9UFD9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC33.78■■■■□ 3
RIMBP3Q9UFD9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC33.78■■■■□ 3
RIMBP3Q9UFD9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
RIMBP3Q9UFD9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC33.78■■■■□ 3
RIMBP3Q9UFD9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC33.78■■■■□ 3
RIMBP3Q9UFD9 CYP2D8P-201ENST00000433633 1490 ntBASIC33.78■■■■□ 3
RIMBP3Q9UFD9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC33.77■■■■□ 3
RIMBP3Q9UFD9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC33.77■■■■□ 3
RIMBP3Q9UFD9 AC009947.2-201ENST00000444014 672 ntBASIC33.77■■■■□ 3
RIMBP3Q9UFD9 AC022616.7-201ENST00000525383 220 ntBASIC33.77■■■■□ 3
RIMBP3Q9UFD9 AF186192.3-201ENST00000583427 947 ntBASIC33.77■■■■□ 3
RIMBP3Q9UFD9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC33.77■■■■□ 3
RIMBP3Q9UFD9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC33.77■■■■□ 3
RIMBP3Q9UFD9 MYC-208ENST00000641036 567 ntBASIC33.77■■■■□ 3
RIMBP3Q9UFD9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC33.77■■■■□ 3
RIMBP3Q9UFD9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC33.76■■■■□ 3
RIMBP3Q9UFD9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC33.76■■■■□ 3
RIMBP3Q9UFD9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
RIMBP3Q9UFD9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC33.76■■■□□ 2.99
RIMBP3Q9UFD9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 REXO1L10P-201ENST00000615707 1290 ntBASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 AC010947.1-201ENST00000623454 693 ntBASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 KRT18P22-201ENST00000402024 1347 ntBASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC33.75■■■□□ 2.99
RIMBP3Q9UFD9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 AL390955.1-201ENST00000428694 934 ntBASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC33.74■■■□□ 2.99
RIMBP3Q9UFD9 AC061975.6-201ENST00000579045 1553 ntBASIC33.73■■■□□ 2.99
RIMBP3Q9UFD9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
RIMBP3Q9UFD9 UNC93B2-201ENST00000285383 730 ntBASIC33.73■■■□□ 2.99
RIMBP3Q9UFD9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
RIMBP3Q9UFD9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
RIMBP3Q9UFD9 AC010203.1-204ENST00000548782 407 ntBASIC33.73■■■□□ 2.99
RIMBP3Q9UFD9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC33.73■■■□□ 2.99
RIMBP3Q9UFD9 DUSP8P4-201ENST00000399538 1761 ntBASIC33.73■■■□□ 2.99
RIMBP3Q9UFD9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC33.73■■■□□ 2.99
RIMBP3Q9UFD9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC33.73■■■□□ 2.99
RIMBP3Q9UFD9 KRT18P68-201ENST00000392293 1000 ntBASIC33.72■■■□□ 2.99
RIMBP3Q9UFD9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
RIMBP3Q9UFD9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC33.72■■■□□ 2.99
RIMBP3Q9UFD9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC33.72■■■□□ 2.99
RIMBP3Q9UFD9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 AC105020.6-201ENST00000621523 1217 ntBASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 MIR1238-201ENST00000408483 83 ntBASIC33.71■■■□□ 2.99
RIMBP3Q9UFD9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC33.71■■■□□ 2.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms