Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 OR10C1-204ENST00000622521 1039 ntBASIC19.65■□□□□ 0.74
CTSFQ9UBX1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.65■□□□□ 0.74
CTSFQ9UBX1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSFQ9UBX1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSFQ9UBX1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSFQ9UBX1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSFQ9UBX1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSFQ9UBX1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSFQ9UBX1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSFQ9UBX1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSFQ9UBX1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTSFQ9UBX1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTSFQ9UBX1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CTSFQ9UBX1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 AC098934.4-201ENST00000564127 592 ntBASIC19.64■□□□□ 0.73
CTSFQ9UBX1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.64■□□□□ 0.73
CTSFQ9UBX1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSFQ9UBX1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CTSFQ9UBX1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSFQ9UBX1 MKRN4P-201ENST00000444706 1521 ntBASIC19.63■□□□□ 0.73
CTSFQ9UBX1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSFQ9UBX1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSFQ9UBX1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.63■□□□□ 0.73
CTSFQ9UBX1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CTSFQ9UBX1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 AC091799.1-201ENST00000422823 811 ntBASIC19.62■□□□□ 0.73
CTSFQ9UBX1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 AL162412.1-201ENST00000567129 965 ntBASIC19.62■□□□□ 0.73
CTSFQ9UBX1 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSFQ9UBX1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSFQ9UBX1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 RARRES2P4-201ENST00000514074 484 ntBASIC19.6■□□□□ 0.73
CTSFQ9UBX1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CTSFQ9UBX1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 MIPEPP3-201ENST00000412105 444 ntBASIC19.59■□□□□ 0.73
CTSFQ9UBX1 AC069152.1-201ENST00000438030 544 ntBASIC19.59■□□□□ 0.73
CTSFQ9UBX1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSFQ9UBX1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms