Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE7Q9UBL6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE7Q9UBL6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE7Q9UBL6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.24■□□□□ 0.83
CPNE7Q9UBL6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.24■□□□□ 0.83
CPNE7Q9UBL6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.24■□□□□ 0.83
CPNE7Q9UBL6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CPNE7Q9UBL6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CPNE7Q9UBL6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE7Q9UBL6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE7Q9UBL6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 MIPEPP3-201ENST00000412105 444 ntBASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CPNE7Q9UBL6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 AC069152.1-201ENST00000438030 544 ntBASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 CDV3P1-201ENST00000471403 739 ntBASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 AC133041.1-202ENST00000642053 222 ntBASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE7Q9UBL6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 AC073210.2-201ENST00000430369 194 ntBASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 MIR4758-201ENST00000577688 71 ntBASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 EP400NL-214ENST00000641289 2402 ntBASIC20.21■□□□□ 0.83
CPNE7Q9UBL6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 AC010980.2-201ENST00000587099 1412 ntBASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 FAM21FP-204ENST00000608637 956 ntBASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE7Q9UBL6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms