Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
COL20A1Q9P218 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL20A1Q9P218 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL20A1Q9P218 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL20A1Q9P218 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
COL20A1Q9P218 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
COL20A1Q9P218 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL20A1Q9P218 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
COL20A1Q9P218 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL20A1Q9P218 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.71■■□□□ 1.39
COL20A1Q9P218 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.71■■□□□ 1.39
COL20A1Q9P218 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.71■■□□□ 1.39
COL20A1Q9P218 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.71■■□□□ 1.39
COL20A1Q9P218 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.71■■□□□ 1.39
COL20A1Q9P218 AC012676.1-201ENST00000574705 1949 ntBASIC23.71■■□□□ 1.39
COL20A1Q9P218 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COL20A1Q9P218 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.7■■□□□ 1.39
COL20A1Q9P218 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
COL20A1Q9P218 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COL20A1Q9P218 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.7■■□□□ 1.38
COL20A1Q9P218 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.7■■□□□ 1.38
COL20A1Q9P218 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COL20A1Q9P218 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
COL20A1Q9P218 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COL20A1Q9P218 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
COL20A1Q9P218 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL20A1Q9P218 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
COL20A1Q9P218 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL20A1Q9P218 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL20A1Q9P218 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL20A1Q9P218 KRT17P1-201ENST00000399211 1546 ntBASIC23.69■■□□□ 1.38
COL20A1Q9P218 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL20A1Q9P218 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL20A1Q9P218 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL20A1Q9P218 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
COL20A1Q9P218 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL20A1Q9P218 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.69■■□□□ 1.38
COL20A1Q9P218 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.69■■□□□ 1.38
COL20A1Q9P218 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL20A1Q9P218 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL20A1Q9P218 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL20A1Q9P218 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.69■■□□□ 1.38
COL20A1Q9P218 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL20A1Q9P218 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.68■■□□□ 1.38
COL20A1Q9P218 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COL20A1Q9P218 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.68■■□□□ 1.38
COL20A1Q9P218 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL20A1Q9P218 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COL20A1Q9P218 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.68■■□□□ 1.38
COL20A1Q9P218 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.68■■□□□ 1.38
COL20A1Q9P218 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.68■■□□□ 1.38
COL20A1Q9P218 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.68■■□□□ 1.38
COL20A1Q9P218 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL20A1Q9P218 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL20A1Q9P218 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.67■■□□□ 1.38
COL20A1Q9P218 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.67■■□□□ 1.38
COL20A1Q9P218 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL20A1Q9P218 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
COL20A1Q9P218 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.67■■□□□ 1.38
COL20A1Q9P218 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.67■■□□□ 1.38
COL20A1Q9P218 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.67■■□□□ 1.38
COL20A1Q9P218 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.67■■□□□ 1.38
COL20A1Q9P218 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL20A1Q9P218 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.67■■□□□ 1.38
COL20A1Q9P218 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL20A1Q9P218 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL20A1Q9P218 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL20A1Q9P218 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL20A1Q9P218 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL20A1Q9P218 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL20A1Q9P218 DUSP5P2-201ENST00000426873 1033 ntBASIC23.66■■□□□ 1.38
COL20A1Q9P218 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.66■■□□□ 1.38
COL20A1Q9P218 CDV3P1-201ENST00000471403 739 ntBASIC23.66■■□□□ 1.38
COL20A1Q9P218 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.66■■□□□ 1.38
COL20A1Q9P218 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.66■■□□□ 1.38
COL20A1Q9P218 AC091874.3-201ENST00000512672 1195 ntBASIC23.66■■□□□ 1.38
COL20A1Q9P218 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL20A1Q9P218 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL20A1Q9P218 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.66■■□□□ 1.38
COL20A1Q9P218 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.66■■□□□ 1.38
COL20A1Q9P218 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL20A1Q9P218 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL20A1Q9P218 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.65■■□□□ 1.38
COL20A1Q9P218 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.65■■□□□ 1.38
COL20A1Q9P218 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
COL20A1Q9P218 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.65■■□□□ 1.38
COL20A1Q9P218 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.65■■□□□ 1.38
COL20A1Q9P218 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
COL20A1Q9P218 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.65■■□□□ 1.38
COL20A1Q9P218 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.65■■□□□ 1.38
COL20A1Q9P218 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL20A1Q9P218 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL20A1Q9P218 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL20A1Q9P218 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL20A1Q9P218 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL20A1Q9P218 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL20A1Q9P218 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL20A1Q9P218 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL20A1Q9P218 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms