Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 AC024257.2-201ENST00000549699 147 ntBASIC19.69■□□□□ 0.74
VAPAQ9P0L0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VAPAQ9P0L0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 AC020907.5-201ENST00000624372 1936 ntBASIC19.68■□□□□ 0.74
VAPAQ9P0L0 AC005224.4-201ENST00000583262 1652 ntBASIC19.68■□□□□ 0.74
VAPAQ9P0L0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VAPAQ9P0L0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.67■□□□□ 0.74
VAPAQ9P0L0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 BX005040.4-201ENST00000637145 1518 ntBASIC19.66■□□□□ 0.74
VAPAQ9P0L0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 AL136162.1-201ENST00000607711 1078 ntBASIC19.66■□□□□ 0.74
VAPAQ9P0L0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.66■□□□□ 0.74
VAPAQ9P0L0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.65■□□□□ 0.74
VAPAQ9P0L0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms