Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KCNIP1Q9NZI2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.46■□□□□ 0.38
KCNIP1Q9NZI2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 MIR939-201ENST00000401314 82 ntBASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.45■□□□□ 0.38
KCNIP1Q9NZI2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 AC110285.6-201ENST00000617652 491 ntBASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.44■□□□□ 0.38
KCNIP1Q9NZI2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNIP1Q9NZI2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms