Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.96■□□□□ 0.46
TREM2Q9NZC2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TREM2Q9NZC2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 BID-214ENST00000617586 542 ntTSL 5 BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TREM2Q9NZC2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 AP001160.3-201ENST00000601484 763 ntBASIC17.93■□□□□ 0.46
TREM2Q9NZC2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TREM2Q9NZC2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 ID1-201ENST00000376105 1233 ntBASIC17.92■□□□□ 0.46
TREM2Q9NZC2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 AC073111.5-205ENST00000641717 521 ntBASIC17.92■□□□□ 0.46
TREM2Q9NZC2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 Z98882.1-201ENST00000622160 2253 ntBASIC17.92■□□□□ 0.46
TREM2Q9NZC2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREM2Q9NZC2 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.91■□□□□ 0.46
TREM2Q9NZC2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREM2Q9NZC2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREM2Q9NZC2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms