Protein–RNA interactions for Protein: Q9NV58

RNF19A, E3 ubiquitin-protein ligase RNF19A, humanhuman

Predictions only

Length 838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19AQ9NV58 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 PRORSD1P-201ENST00000295112 541 ntBASIC22.68■■□□□ 1.22
RNF19AQ9NV58 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 AC091799.1-201ENST00000422823 811 ntBASIC22.68■■□□□ 1.22
RNF19AQ9NV58 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF19AQ9NV58 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 DUSP5P2-201ENST00000426873 1033 ntBASIC22.67■■□□□ 1.22
RNF19AQ9NV58 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RNF19AQ9NV58 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 AC097658.1-201ENST00000475555 843 ntBASIC22.66■■□□□ 1.22
RNF19AQ9NV58 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF19AQ9NV58 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.65■■□□□ 1.22
RNF19AQ9NV58 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF19AQ9NV58 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF19AQ9NV58 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.22
RNF19AQ9NV58 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF19AQ9NV58 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
RNF19AQ9NV58 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
RNF19AQ9NV58 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF19AQ9NV58 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF19AQ9NV58 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF19AQ9NV58 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF19AQ9NV58 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF19AQ9NV58 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF19AQ9NV58 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
RNF19AQ9NV58 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF19AQ9NV58 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF19AQ9NV58 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF19AQ9NV58 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF19AQ9NV58 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF19AQ9NV58 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF19AQ9NV58 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF19AQ9NV58 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF19AQ9NV58 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF19AQ9NV58 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF19AQ9NV58 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms