Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB16Q9NRJ7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB16Q9NRJ7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB16Q9NRJ7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB16Q9NRJ7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB16Q9NRJ7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB16Q9NRJ7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHB16Q9NRJ7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDHB16Q9NRJ7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 AP006587.3-201ENST00000525742 1516 ntBASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 BX842568.3-201ENST00000418104 571 ntBASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDHB16Q9NRJ7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 AL020996.1-203ENST00000536896 2307 ntBASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB16Q9NRJ7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 AL049796.1-201ENST00000565336 1766 ntBASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB16Q9NRJ7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 AC009237.3-201ENST00000393279 1427 ntBASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB16Q9NRJ7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms