Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTPS2Q9NRF8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.35■□□□□ 0.69
CTPS2Q9NRF8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS2Q9NRF8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTPS2Q9NRF8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.33■□□□□ 0.69
CTPS2Q9NRF8 AC005224.4-201ENST00000583262 1652 ntBASIC19.33■□□□□ 0.69
CTPS2Q9NRF8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CTPS2Q9NRF8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTPS2Q9NRF8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.33■□□□□ 0.69
CTPS2Q9NRF8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTPS2Q9NRF8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTPS2Q9NRF8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTPS2Q9NRF8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTPS2Q9NRF8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.33■□□□□ 0.68
CTPS2Q9NRF8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.33■□□□□ 0.68
CTPS2Q9NRF8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.32■□□□□ 0.68
CTPS2Q9NRF8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS2Q9NRF8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS2Q9NRF8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS2Q9NRF8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.32■□□□□ 0.68
CTPS2Q9NRF8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS2Q9NRF8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS2Q9NRF8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS2Q9NRF8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.32■□□□□ 0.68
CTPS2Q9NRF8 AC055733.4-201ENST00000638462 1354 ntBASIC19.32■□□□□ 0.68
CTPS2Q9NRF8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS2Q9NRF8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 TPRG1LP1-201ENST00000598702 760 ntBASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 LINC01006-201ENST00000333319 2292 ntBASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTPS2Q9NRF8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTPS2Q9NRF8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms