Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 IGHV3-19-201ENST00000521488 291 ntBASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 PCDHAC2-203ENST00000615316 3011 ntBASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 AC112907.3-201ENST00000577781 2400 ntBASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 FP700111.2-201ENST00000619190 1892 ntBASIC19.77■□□□□ 0.76
SLC52A3Q9NQ40 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC52A3Q9NQ40 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.77■□□□□ 0.75
SLC52A3Q9NQ40 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 AC099778.1-201ENST00000568593 1911 ntBASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC52A3Q9NQ40 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 AC131212.1-201ENST00000613771 668 ntBASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 AC011484.1-201ENST00000377652 1995 ntBASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC52A3Q9NQ40 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 UNC93B3-201ENST00000308076 687 ntBASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC52A3Q9NQ40 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC52A3Q9NQ40 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms