Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 AC243732.1-201ENST00000612648 864 ntBASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6V0A4Q9HBG4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 ABHD17AP1-201ENST00000358206 933 ntBASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 SLC29A4P1-201ENST00000398760 971 ntBASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 AC007322.4-201ENST00000509611 723 ntBASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.18■■□□□ 1.3
ATP6V0A4Q9HBG4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 GUSBP6-202ENST00000438529 1198 ntBASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 AC245052.3-201ENST00000450182 901 ntBASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A4Q9HBG4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 CD99P1-205ENST00000527459 561 ntBASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A4Q9HBG4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.15■■□□□ 1.3
ATP6V0A4Q9HBG4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
ATP6V0A4Q9HBG4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
ATP6V0A4Q9HBG4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A4Q9HBG4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A4Q9HBG4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A4Q9HBG4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A4Q9HBG4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.15■■□□□ 1.3
ATP6V0A4Q9HBG4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.14■■□□□ 1.3
ATP6V0A4Q9HBG4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
ATP6V0A4Q9HBG4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.14■■□□□ 1.3
ATP6V0A4Q9HBG4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ATP6V0A4Q9HBG4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 AF201337.1-201ENST00000520239 748 ntBASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.14■■□□□ 1.29
ATP6V0A4Q9HBG4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms