Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 AC055733.4-201ENST00000638462 1354 ntBASIC20.16■□□□□ 0.82
SOX17Q9H6I2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 AL034346.1-201ENST00000568244 1277 ntBASIC20.15■□□□□ 0.82
SOX17Q9H6I2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SOX17Q9H6I2 RNF165-205ENST00000588679 2904 ntBASIC20.14■□□□□ 0.82
SOX17Q9H6I2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SOX17Q9H6I2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
SOX17Q9H6I2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SOX17Q9H6I2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.81
SOX17Q9H6I2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 Z98882.1-201ENST00000622160 2253 ntBASIC20.13■□□□□ 0.81
SOX17Q9H6I2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 AC080038.1-201ENST00000611274 1154 ntBASIC20.13■□□□□ 0.81
SOX17Q9H6I2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX17Q9H6I2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.12■□□□□ 0.81
SOX17Q9H6I2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX17Q9H6I2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.12■□□□□ 0.81
SOX17Q9H6I2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.12■□□□□ 0.81
SOX17Q9H6I2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX17Q9H6I2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX17Q9H6I2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.12■□□□□ 0.81
SOX17Q9H6I2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SOX17Q9H6I2 FEM1AP4-201ENST00000443167 1987 ntBASIC20.12■□□□□ 0.81
SOX17Q9H6I2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX17Q9H6I2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX17Q9H6I2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX17Q9H6I2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SOX17Q9H6I2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.1■□□□□ 0.81
SOX17Q9H6I2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX17Q9H6I2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX17Q9H6I2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX17Q9H6I2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX17Q9H6I2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX17Q9H6I2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
SOX17Q9H6I2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms