Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 AP000974.1-201ENST00000623909 2387 ntBASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 AC006455.2-201ENST00000429931 906 ntBASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 AL158211.5-201ENST00000623583 2518 ntBASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
KCNF1Q9H3M0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
KCNF1Q9H3M0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 AL034346.1-201ENST00000568244 1277 ntBASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
KCNF1Q9H3M0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.74■■□□□ 1.23
KCNF1Q9H3M0 AC068587.7-201ENST00000641602 218 ntBASIC22.74■■□□□ 1.23
KCNF1Q9H3M0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
KCNF1Q9H3M0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
KCNF1Q9H3M0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
KCNF1Q9H3M0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KCNF1Q9H3M0 KRT8P33-201ENST00000508125 1423 ntBASIC22.74■■□□□ 1.23
KCNF1Q9H3M0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 AC010141.3-201ENST00000456659 717 ntBASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 HSD17B1P1-201ENST00000590052 955 ntBASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 pRNA.6-201ENST00000610482 90 ntBASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 pRNA.5-201ENST00000612139 90 ntBASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 pRNA.11-201ENST00000618423 90 ntBASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 pRNA.13-201ENST00000619112 90 ntBASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 TNXA-203ENST00000507684 2038 ntBASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
KCNF1Q9H3M0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 AP006587.3-201ENST00000525742 1516 ntBASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
KCNF1Q9H3M0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms