Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 AC068418.2-201ENST00000577309 3703 ntBASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 AC005332.7-201ENST00000614046 2005 ntBASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CYSTM1Q9H1C7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CYSTM1Q9H1C7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 NOC2LP2-201ENST00000407594 1944 ntBASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 AL138781.2-201ENST00000617896 1843 ntBASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 AC079598.2-202ENST00000546624 1451 ntBASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 PWWP2AP1-201ENST00000429776 2273 ntBASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CYSTM1Q9H1C7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
CYSTM1Q9H1C7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.19□□□□□ -0.46
CYSTM1Q9H1C7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CYSTM1Q9H1C7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CYSTM1Q9H1C7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CYSTM1Q9H1C7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CYSTM1Q9H1C7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CYSTM1Q9H1C7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CYSTM1Q9H1C7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CYSTM1Q9H1C7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms