Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 AC133681.1-201ENST00000465482 601 ntBASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 AC012676.1-201ENST00000574705 1949 ntBASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3Q9BZ76 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 AL137013.1-201ENST00000432946 1228 ntBASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 AC104076.2-201ENST00000448912 469 ntBASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3Q9BZ76 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 TERF1P1-201ENST00000311003 1181 ntBASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 WWOX-216ENST00000569818 525 ntBASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 AC091076.1-201ENST00000610741 619 ntBASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 AL358472.4-201ENST00000633140 710 ntBASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.92■□□□□ 0.78
CNTNAP3Q9BZ76 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 AC239809.2-201ENST00000415381 517 ntBASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 MTDHP1-201ENST00000605323 784 ntBASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTNAP3Q9BZ76 HLA-L-211ENST00000482052 1765 ntBASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CNTNAP3Q9BZ76 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CNTNAP3Q9BZ76 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CNTNAP3Q9BZ76 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CNTNAP3Q9BZ76 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms