Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 AC087289.5-201ENST00000586076 3175 ntBASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 AL020996.1-203ENST00000536896 2307 ntBASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 AP006587.3-201ENST00000525742 1516 ntBASIC18.69■□□□□ 0.58
CDCA4Q9BXL8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 BX323043.1-201ENST00000641006 1765 ntBASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.68■□□□□ 0.58
CDCA4Q9BXL8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 AC006455.2-201ENST00000429931 906 ntBASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 AL356441.2-201ENST00000443009 864 ntBASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA4Q9BXL8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA4Q9BXL8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 AC018445.3-201ENST00000624177 1945 ntBASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA4Q9BXL8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDCA4Q9BXL8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDCA4Q9BXL8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDCA4Q9BXL8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDCA4Q9BXL8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 AC010997.5-201ENST00000609182 354 ntBASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDCA4Q9BXL8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms