Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 EDA-201ENST00000338901 1233 ntBASIC12.35□□□□□ -0.43
LIMD2Q9BT23 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 GRAMD4P2-201ENST00000423297 1097 ntBASIC12.35□□□□□ -0.43
LIMD2Q9BT23 AC096631.2-201ENST00000436136 790 ntBASIC12.35□□□□□ -0.43
LIMD2Q9BT23 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 MPST-208ENST00000628507 698 ntTSL 5 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 AP004607.7-201ENST00000527152 1677 ntBASIC12.35□□□□□ -0.43
LIMD2Q9BT23 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIMD2Q9BT23 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 PBX2P1-201ENST00000493219 1291 ntBASIC12.34□□□□□ -0.43
LIMD2Q9BT23 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 FBXW4P1-201ENST00000426721 2239 ntBASIC12.34□□□□□ -0.43
LIMD2Q9BT23 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIMD2Q9BT23 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIMD2Q9BT23 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms