Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.72■□□□□ 0.43
CMSS1Q9BQ75 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMSS1Q9BQ75 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CMSS1Q9BQ75 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 MIR4466-201ENST00000606121 54 ntBASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMSS1Q9BQ75 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 AC006128.1-201ENST00000624704 1661 ntBASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 AL356441.2-201ENST00000443009 864 ntBASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.69■□□□□ 0.42
CMSS1Q9BQ75 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms