Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF5Q99942 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.66■□□□□ 0.26
RNF5Q99942 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF5Q99942 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF5Q99942 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF5Q99942 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF5Q99942 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF5Q99942 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF5Q99942 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF5Q99942 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF5Q99942 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RNF5Q99942 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF5Q99942 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF5Q99942 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF5Q99942 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF5Q99942 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF5Q99942 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF5Q99942 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF5Q99942 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.65■□□□□ 0.26
RNF5Q99942 AC243732.1-201ENST00000612648 864 ntBASIC16.65■□□□□ 0.26
RNF5Q99942 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF5Q99942 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF5Q99942 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF5Q99942 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.65■□□□□ 0.26
RNF5Q99942 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF5Q99942 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF5Q99942 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF5Q99942 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.64■□□□□ 0.26
RNF5Q99942 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF5Q99942 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF5Q99942 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF5Q99942 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
RNF5Q99942 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF5Q99942 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF5Q99942 AC011484.1-201ENST00000377652 1995 ntBASIC16.64■□□□□ 0.25
RNF5Q99942 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF5Q99942 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF5Q99942 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF5Q99942 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF5Q99942 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF5Q99942 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF5Q99942 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF5Q99942 RARRES2P11-201ENST00000635158 484 ntBASIC16.64■□□□□ 0.25
RNF5Q99942 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF5Q99942 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF5Q99942 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF5Q99942 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF5Q99942 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF5Q99942 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF5Q99942 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF5Q99942 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF5Q99942 AC006128.1-201ENST00000624704 1661 ntBASIC16.63■□□□□ 0.25
RNF5Q99942 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF5Q99942 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF5Q99942 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF5Q99942 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.63■□□□□ 0.25
RNF5Q99942 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
RNF5Q99942 NTF6G-201ENST00000591094 616 ntBASIC16.63■□□□□ 0.25
RNF5Q99942 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF5Q99942 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF5Q99942 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF5Q99942 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF5Q99942 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF5Q99942 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF5Q99942 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF5Q99942 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF5Q99942 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RNF5Q99942 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF5Q99942 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF5Q99942 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF5Q99942 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF5Q99942 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF5Q99942 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF5Q99942 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF5Q99942 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF5Q99942 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF5Q99942 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF5Q99942 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF5Q99942 KRT18P11-201ENST00000435214 1283 ntBASIC16.62■□□□□ 0.25
RNF5Q99942 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RNF5Q99942 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF5Q99942 SLC7A5P2-201ENST00000553010 536 ntBASIC16.62■□□□□ 0.25
RNF5Q99942 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF5Q99942 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF5Q99942 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF5Q99942 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF5Q99942 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF5Q99942 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF5Q99942 AC019069.1-201ENST00000610008 1333 ntBASIC16.62■□□□□ 0.25
RNF5Q99942 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF5Q99942 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms