Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
NPAS1Q99742 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS1Q99742 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS1Q99742 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NPAS1Q99742 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS1Q99742 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS1Q99742 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS1Q99742 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NPAS1Q99742 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.98■□□□□ 0.63
NPAS1Q99742 AC004911.1-201ENST00000416316 871 ntBASIC18.98■□□□□ 0.63
NPAS1Q99742 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NPAS1Q99742 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS1Q99742 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS1Q99742 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.98■□□□□ 0.63
NPAS1Q99742 AC008175.2-201ENST00000612840 297 ntBASIC18.98■□□□□ 0.63
NPAS1Q99742 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS1Q99742 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS1Q99742 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NPAS1Q99742 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS1Q99742 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS1Q99742 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS1Q99742 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NPAS1Q99742 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS1Q99742 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS1Q99742 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NPAS1Q99742 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.97■□□□□ 0.63
NPAS1Q99742 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS1Q99742 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS1Q99742 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS1Q99742 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.97■□□□□ 0.63
NPAS1Q99742 AC016769.1-201ENST00000409132 1010 ntBASIC18.97■□□□□ 0.63
NPAS1Q99742 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS1Q99742 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS1Q99742 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS1Q99742 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NPAS1Q99742 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS1Q99742 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS1Q99742 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.97■□□□□ 0.63
NPAS1Q99742 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS1Q99742 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NPAS1Q99742 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NPAS1Q99742 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 POU5F1P4-201ENST00000413175 1085 ntBASIC18.96■□□□□ 0.63
NPAS1Q99742 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.96■□□□□ 0.63
NPAS1Q99742 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS1Q99742 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.96■□□□□ 0.63
NPAS1Q99742 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS1Q99742 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS1Q99742 MYCNOS-205ENST00000641950 531 ntBASIC18.96■□□□□ 0.63
NPAS1Q99742 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS1Q99742 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.96■□□□□ 0.63
NPAS1Q99742 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.96■□□□□ 0.63
NPAS1Q99742 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS1Q99742 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NPAS1Q99742 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.95■□□□□ 0.62
NPAS1Q99742 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS1Q99742 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 MFSD11-216ENST00000590393 1141 ntBASIC18.95■□□□□ 0.62
NPAS1Q99742 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.95■□□□□ 0.62
NPAS1Q99742 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NPAS1Q99742 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS1Q99742 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS1Q99742 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS1Q99742 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS1Q99742 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NPAS1Q99742 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS1Q99742 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS1Q99742 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS1Q99742 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS1Q99742 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS1Q99742 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS1Q99742 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS1Q99742 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS1Q99742 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.94■□□□□ 0.62
NPAS1Q99742 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS1Q99742 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS1Q99742 KRT18P20-201ENST00000548986 1279 ntBASIC18.94■□□□□ 0.62
NPAS1Q99742 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NPAS1Q99742 AL137784.2-201ENST00000607332 1000 ntBASIC18.94■□□□□ 0.62
NPAS1Q99742 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS1Q99742 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms