Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NOTCH4Q99466 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.68■■□□□ 1.06
NOTCH4Q99466 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NOTCH4Q99466 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NOTCH4Q99466 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NOTCH4Q99466 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NOTCH4Q99466 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NOTCH4Q99466 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NOTCH4Q99466 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NOTCH4Q99466 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.67■■□□□ 1.06
NOTCH4Q99466 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.67■■□□□ 1.06
NOTCH4Q99466 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NOTCH4Q99466 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
NOTCH4Q99466 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.67■■□□□ 1.06
NOTCH4Q99466 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NOTCH4Q99466 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NOTCH4Q99466 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.67■■□□□ 1.06
NOTCH4Q99466 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.67■■□□□ 1.06
NOTCH4Q99466 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.66■■□□□ 1.06
NOTCH4Q99466 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NOTCH4Q99466 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.66■■□□□ 1.06
NOTCH4Q99466 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.66■■□□□ 1.06
NOTCH4Q99466 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NOTCH4Q99466 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NOTCH4Q99466 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NOTCH4Q99466 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.66■■□□□ 1.06
NOTCH4Q99466 AC233263.1-201ENST00000578059 224 ntBASIC21.66■■□□□ 1.06
NOTCH4Q99466 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
NOTCH4Q99466 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NOTCH4Q99466 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NOTCH4Q99466 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NOTCH4Q99466 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NOTCH4Q99466 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NOTCH4Q99466 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NOTCH4Q99466 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
NOTCH4Q99466 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.65■■□□□ 1.06
NOTCH4Q99466 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.65■■□□□ 1.06
NOTCH4Q99466 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.65■■□□□ 1.06
NOTCH4Q99466 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.65■■□□□ 1.06
NOTCH4Q99466 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
NOTCH4Q99466 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOTCH4Q99466 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
NOTCH4Q99466 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NOTCH4Q99466 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NOTCH4Q99466 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NOTCH4Q99466 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.64■■□□□ 1.06
NOTCH4Q99466 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
NOTCH4Q99466 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NOTCH4Q99466 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.64■■□□□ 1.05
NOTCH4Q99466 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.64■■□□□ 1.05
NOTCH4Q99466 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
NOTCH4Q99466 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NOTCH4Q99466 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
NOTCH4Q99466 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NOTCH4Q99466 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NOTCH4Q99466 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NOTCH4Q99466 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NOTCH4Q99466 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.64■■□□□ 1.05
NOTCH4Q99466 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NOTCH4Q99466 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NOTCH4Q99466 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NOTCH4Q99466 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NOTCH4Q99466 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.63■■□□□ 1.05
NOTCH4Q99466 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.63■■□□□ 1.05
NOTCH4Q99466 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.63■■□□□ 1.05
NOTCH4Q99466 AC069544.1-201ENST00000609399 999 ntBASIC21.63■■□□□ 1.05
NOTCH4Q99466 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NOTCH4Q99466 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NOTCH4Q99466 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NOTCH4Q99466 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.63■■□□□ 1.05
NOTCH4Q99466 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.63■■□□□ 1.05
NOTCH4Q99466 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
NOTCH4Q99466 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.63■■□□□ 1.05
NOTCH4Q99466 AC008550.1-201ENST00000511500 884 ntBASIC21.63■■□□□ 1.05
NOTCH4Q99466 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NOTCH4Q99466 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.63■■□□□ 1.05
NOTCH4Q99466 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.62■■□□□ 1.05
NOTCH4Q99466 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.62■■□□□ 1.05
NOTCH4Q99466 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.62■■□□□ 1.05
NOTCH4Q99466 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.62■■□□□ 1.05
NOTCH4Q99466 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.62■■□□□ 1.05
NOTCH4Q99466 AP006294.2-201ENST00000641667 209 ntBASIC21.62■■□□□ 1.05
NOTCH4Q99466 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms