Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 AC013268.1-206ENST00000638368 961 ntBASIC21.53■■□□□ 1.04
RPRD1AQ96P16 AC112229.1-201ENST00000639295 961 ntBASIC21.53■■□□□ 1.04
RPRD1AQ96P16 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPRD1AQ96P16 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.52■■□□□ 1.03
RPRD1AQ96P16 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RPRD1AQ96P16 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RPRD1AQ96P16 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.51■■□□□ 1.03
RPRD1AQ96P16 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 CNN2P6-201ENST00000439038 900 ntBASIC21.51■■□□□ 1.03
RPRD1AQ96P16 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPRD1AQ96P16 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 AC243732.1-201ENST00000612648 864 ntBASIC21.5■■□□□ 1.03
RPRD1AQ96P16 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPRD1AQ96P16 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RPRD1AQ96P16 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPRD1AQ96P16 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPRD1AQ96P16 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.49■■□□□ 1.03
RPRD1AQ96P16 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.49■■□□□ 1.03
RPRD1AQ96P16 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RPRD1AQ96P16 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPRD1AQ96P16 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 MIR663A-201ENST00000385250 93 ntBASIC21.48■■□□□ 1.03
RPRD1AQ96P16 CROCCP5-201ENST00000436658 830 ntBASIC21.48■■□□□ 1.03
RPRD1AQ96P16 AC006970.2-201ENST00000450065 779 ntBASIC21.48■■□□□ 1.03
RPRD1AQ96P16 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPRD1AQ96P16 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.47■■□□□ 1.03
RPRD1AQ96P16 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPRD1AQ96P16 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RPRD1AQ96P16 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPRD1AQ96P16 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.47■■□□□ 1.03
RPRD1AQ96P16 AC007322.4-201ENST00000509611 723 ntBASIC21.47■■□□□ 1.03
RPRD1AQ96P16 AC005181.1-201ENST00000604782 1256 ntBASIC21.47■■□□□ 1.03
RPRD1AQ96P16 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPRD1AQ96P16 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RPRD1AQ96P16 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RPRD1AQ96P16 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RPRD1AQ96P16 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RPRD1AQ96P16 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPRD1AQ96P16 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
RPRD1AQ96P16 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPRD1AQ96P16 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms