Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 UNC93B4-201ENST00000505679 747 ntBASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 AC073648.6-201ENST00000641589 218 ntBASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 LSM12P1-201ENST00000411836 588 ntBASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 AP003097.1-201ENST00000530657 1135 ntBASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC46A1Q96NT5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC46A1Q96NT5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC46A1Q96NT5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SLC46A1Q96NT5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC46A1Q96NT5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms