Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COX4I2Q96KJ9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 KRT18P5-201ENST00000436075 1291 ntBASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COX4I2Q96KJ9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 AC136469.2-201ENST00000623944 1028 ntBASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COX4I2Q96KJ9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 AC092437.1-201ENST00000624794 1048 ntBASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COX4I2Q96KJ9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COX4I2Q96KJ9 ALDH1A3-203ENST00000557963 1670 ntBASIC19.14■□□□□ 0.66
COX4I2Q96KJ9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.14■□□□□ 0.66
COX4I2Q96KJ9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COX4I2Q96KJ9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.14■□□□□ 0.66
COX4I2Q96KJ9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
COX4I2Q96KJ9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 YBX1P1-201ENST00000445822 960 ntBASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 AC087742.1-201ENST00000575880 1738 ntBASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.14■□□□□ 0.65
COX4I2Q96KJ9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms