Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 AC010542.4-201ENST00000563151 1910 ntBASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.6■□□□□ 0.89
SH3KBP1Q96B97 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 AC003102.1-202ENST00000563394 1796 ntBASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3KBP1Q96B97 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 POU5F1P4-201ENST00000413175 1085 ntBASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 AC007322.1-201ENST00000426983 750 ntBASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 DUX4L16-201ENST00000555130 1264 ntBASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3KBP1Q96B97 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.58■□□□□ 0.88
SH3KBP1Q96B97 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.58■□□□□ 0.88
SH3KBP1Q96B97 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3KBP1Q96B97 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3KBP1Q96B97 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.58■□□□□ 0.88
SH3KBP1Q96B97 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3KBP1Q96B97 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 HLA-L-209ENST00000420110 1011 ntBASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 CROCCP5-201ENST00000436658 830 ntBASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3KBP1Q96B97 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 AL137060.1-201ENST00000618151 2648 ntBASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 AC010536.3-201ENST00000620306 533 ntBASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3KBP1Q96B97 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms