Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTP4A1Q93096 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PTP4A1Q93096 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
PTP4A1Q93096 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.71■□□□□ 0.59
PTP4A1Q93096 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A1Q93096 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A1Q93096 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A1Q93096 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A1Q93096 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.71■□□□□ 0.59
PTP4A1Q93096 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PTP4A1Q93096 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A1Q93096 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.71■□□□□ 0.59
PTP4A1Q93096 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A1Q93096 AC091305.1-201ENST00000479476 895 ntBASIC18.71■□□□□ 0.59
PTP4A1Q93096 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.71■□□□□ 0.59
PTP4A1Q93096 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.71■□□□□ 0.59
PTP4A1Q93096 AF213884.3-201ENST00000563833 479 ntBASIC18.71■□□□□ 0.59
PTP4A1Q93096 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PTP4A1Q93096 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.71■□□□□ 0.59
PTP4A1Q93096 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTP4A1Q93096 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A1Q93096 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTP4A1Q93096 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A1Q93096 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A1Q93096 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTP4A1Q93096 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
PTP4A1Q93096 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A1Q93096 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.7■□□□□ 0.58
PTP4A1Q93096 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.7■□□□□ 0.58
PTP4A1Q93096 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A1Q93096 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A1Q93096 IGHV3-19-201ENST00000521488 291 ntBASIC18.7■□□□□ 0.58
PTP4A1Q93096 AC142381.2-201ENST00000566120 298 ntBASIC18.7■□□□□ 0.58
PTP4A1Q93096 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A1Q93096 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.7■□□□□ 0.58
PTP4A1Q93096 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTP4A1Q93096 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A1Q93096 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PTP4A1Q93096 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A1Q93096 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.7■□□□□ 0.58
PTP4A1Q93096 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTP4A1Q93096 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTP4A1Q93096 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.69■□□□□ 0.58
PTP4A1Q93096 MIR638-201ENST00000385237 100 ntBASIC18.69■□□□□ 0.58
PTP4A1Q93096 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.69■□□□□ 0.58
PTP4A1Q93096 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.69■□□□□ 0.58
PTP4A1Q93096 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PTP4A1Q93096 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PTP4A1Q93096 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTP4A1Q93096 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
PTP4A1Q93096 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PTP4A1Q93096 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PTP4A1Q93096 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PTP4A1Q93096 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTP4A1Q93096 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTP4A1Q93096 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTP4A1Q93096 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTP4A1Q93096 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTP4A1Q93096 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PTP4A1Q93096 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.68■□□□□ 0.58
PTP4A1Q93096 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.68■□□□□ 0.58
PTP4A1Q93096 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTP4A1Q93096 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTP4A1Q93096 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.68■□□□□ 0.58
PTP4A1Q93096 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTP4A1Q93096 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTP4A1Q93096 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PTP4A1Q93096 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTP4A1Q93096 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTP4A1Q93096 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.68■□□□□ 0.58
PTP4A1Q93096 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.68■□□□□ 0.58
PTP4A1Q93096 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.67■□□□□ 0.58
PTP4A1Q93096 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.67■□□□□ 0.58
PTP4A1Q93096 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.67■□□□□ 0.58
PTP4A1Q93096 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.67■□□□□ 0.58
PTP4A1Q93096 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTP4A1Q93096 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.67■□□□□ 0.58
PTP4A1Q93096 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
PTP4A1Q93096 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTP4A1Q93096 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.67■□□□□ 0.58
PTP4A1Q93096 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTP4A1Q93096 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.66■□□□□ 0.58
PTP4A1Q93096 AC005224.4-201ENST00000583262 1652 ntBASIC18.66■□□□□ 0.58
PTP4A1Q93096 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTP4A1Q93096 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTP4A1Q93096 AC007225.1-201ENST00000566331 1836 ntBASIC18.66■□□□□ 0.58
PTP4A1Q93096 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTP4A1Q93096 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTP4A1Q93096 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.66■□□□□ 0.58
PTP4A1Q93096 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms