Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HPS1Q92902 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HPS1Q92902 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS1Q92902 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS1Q92902 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.89■□□□□ 0.61
HPS1Q92902 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HPS1Q92902 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HPS1Q92902 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS1Q92902 AC026271.2-201ENST00000428091 497 ntBASIC18.89■□□□□ 0.61
HPS1Q92902 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.89■□□□□ 0.61
HPS1Q92902 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.89■□□□□ 0.61
HPS1Q92902 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HPS1Q92902 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS1Q92902 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HPS1Q92902 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HPS1Q92902 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.89■□□□□ 0.61
HPS1Q92902 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
HPS1Q92902 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS1Q92902 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HPS1Q92902 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.88■□□□□ 0.61
HPS1Q92902 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HPS1Q92902 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 CA15P2-201ENST00000611168 834 ntBASIC18.88■□□□□ 0.61
HPS1Q92902 AC009086.3-201ENST00000623486 1008 ntBASIC18.88■□□□□ 0.61
HPS1Q92902 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 LINC01529-204ENST00000636474 1715 ntBASIC18.88■□□□□ 0.61
HPS1Q92902 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HPS1Q92902 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.88■□□□□ 0.61
HPS1Q92902 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.88■□□□□ 0.61
HPS1Q92902 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HPS1Q92902 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HPS1Q92902 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HPS1Q92902 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.87■□□□□ 0.61
HPS1Q92902 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 FEM1AP4-201ENST00000443167 1987 ntBASIC18.87■□□□□ 0.61
HPS1Q92902 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.87■□□□□ 0.61
HPS1Q92902 PCDHAC2-203ENST00000615316 3011 ntBASIC18.87■□□□□ 0.61
HPS1Q92902 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HPS1Q92902 AC136469.2-201ENST00000623944 1028 ntBASIC18.87■□□□□ 0.61
HPS1Q92902 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HPS1Q92902 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HPS1Q92902 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS1Q92902 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HPS1Q92902 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.86■□□□□ 0.61
HPS1Q92902 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HPS1Q92902 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS1Q92902 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS1Q92902 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS1Q92902 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HPS1Q92902 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.85■□□□□ 0.61
HPS1Q92902 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS1Q92902 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS1Q92902 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.85■□□□□ 0.61
HPS1Q92902 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.85■□□□□ 0.61
HPS1Q92902 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS1Q92902 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.85■□□□□ 0.61
HPS1Q92902 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS1Q92902 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS1Q92902 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.85■□□□□ 0.61
HPS1Q92902 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.85■□□□□ 0.61
HPS1Q92902 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HPS1Q92902 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS1Q92902 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS1Q92902 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS1Q92902 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HPS1Q92902 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS1Q92902 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS1Q92902 AC138932.1-201ENST00000534164 6830 ntBASIC18.84■□□□□ 0.61
HPS1Q92902 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS1Q92902 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS1Q92902 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms