Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 KRT16P2-201ENST00000414673 1423 ntBASIC20.32■□□□□ 0.84
ATL1Q8WXF7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 AC034268.1-201ENST00000441047 882 ntBASIC20.31■□□□□ 0.84
ATL1Q8WXF7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 AP001160.3-201ENST00000601484 763 ntBASIC20.31■□□□□ 0.84
ATL1Q8WXF7 MIR6821-201ENST00000617625 74 ntBASIC20.31■□□□□ 0.84
ATL1Q8WXF7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.31■□□□□ 0.84
ATL1Q8WXF7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 KRT18P20-201ENST00000548986 1279 ntBASIC20.3■□□□□ 0.84
ATL1Q8WXF7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATL1Q8WXF7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 AC004854.2-201ENST00000608450 1441 ntBASIC20.29■□□□□ 0.84
ATL1Q8WXF7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 KRT19P1-201ENST00000405746 1186 ntBASIC20.29■□□□□ 0.84
ATL1Q8WXF7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.29■□□□□ 0.84
ATL1Q8WXF7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATL1Q8WXF7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATL1Q8WXF7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
ATL1Q8WXF7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATL1Q8WXF7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.26■□□□□ 0.83
ATL1Q8WXF7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATL1Q8WXF7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATL1Q8WXF7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATL1Q8WXF7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATL1Q8WXF7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATL1Q8WXF7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATL1Q8WXF7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.26■□□□□ 0.83
ATL1Q8WXF7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms