Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 AC005224.4-201ENST00000583262 1652 ntBASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC44A1Q8WWI5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 BX005040.4-201ENST00000637145 1518 ntBASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 AC126544.1-201ENST00000580842 1059 ntBASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 AL391422.3-201ENST00000603791 2761 ntBASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SLC44A1Q8WWI5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC44A1Q8WWI5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 UNC93B3-201ENST00000308076 687 ntBASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 AL136116.3-201ENST00000402907 1138 ntBASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC44A1Q8WWI5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 AL162377.1-201ENST00000618844 1793 ntBASIC20.85■□□□□ 0.93
SLC44A1Q8WWI5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms