Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 TSPY9P-201ENST00000440215 945 ntBASIC18.86■□□□□ 0.61
APH1BQ8WW43 TSPY11P-201ENST00000442607 1045 ntBASIC18.86■□□□□ 0.61
APH1BQ8WW43 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
APH1BQ8WW43 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APH1BQ8WW43 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APH1BQ8WW43 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.86■□□□□ 0.61
APH1BQ8WW43 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APH1BQ8WW43 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APH1BQ8WW43 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
APH1BQ8WW43 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
APH1BQ8WW43 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
APH1BQ8WW43 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
APH1BQ8WW43 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
APH1BQ8WW43 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.85■□□□□ 0.61
APH1BQ8WW43 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.85■□□□□ 0.61
APH1BQ8WW43 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
APH1BQ8WW43 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
APH1BQ8WW43 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.85■□□□□ 0.61
APH1BQ8WW43 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APH1BQ8WW43 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APH1BQ8WW43 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
APH1BQ8WW43 FP700111.2-201ENST00000619190 1892 ntBASIC18.84■□□□□ 0.61
APH1BQ8WW43 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APH1BQ8WW43 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APH1BQ8WW43 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.84■□□□□ 0.61
APH1BQ8WW43 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APH1BQ8WW43 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
APH1BQ8WW43 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APH1BQ8WW43 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
APH1BQ8WW43 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
APH1BQ8WW43 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
APH1BQ8WW43 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APH1BQ8WW43 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APH1BQ8WW43 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APH1BQ8WW43 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APH1BQ8WW43 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
APH1BQ8WW43 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APH1BQ8WW43 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APH1BQ8WW43 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.82■□□□□ 0.6
APH1BQ8WW43 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1BQ8WW43 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1BQ8WW43 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
APH1BQ8WW43 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1BQ8WW43 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APH1BQ8WW43 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1BQ8WW43 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.82■□□□□ 0.6
APH1BQ8WW43 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.82■□□□□ 0.6
APH1BQ8WW43 MIR6724-1-201ENST00000616420 92 ntBASIC18.82■□□□□ 0.6
APH1BQ8WW43 MIR6724-2-201ENST00000616483 92 ntBASIC18.82■□□□□ 0.6
APH1BQ8WW43 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APH1BQ8WW43 MIR6724-4-201ENST00000617390 92 ntBASIC18.82■□□□□ 0.6
APH1BQ8WW43 MIR6724-3-201ENST00000622482 92 ntBASIC18.82■□□□□ 0.6
APH1BQ8WW43 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
APH1BQ8WW43 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1BQ8WW43 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.82■□□□□ 0.6
APH1BQ8WW43 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
APH1BQ8WW43 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1BQ8WW43 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.82■□□□□ 0.6
APH1BQ8WW43 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APH1BQ8WW43 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.81■□□□□ 0.6
APH1BQ8WW43 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.81■□□□□ 0.6
APH1BQ8WW43 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APH1BQ8WW43 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APH1BQ8WW43 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APH1BQ8WW43 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.81■□□□□ 0.6
APH1BQ8WW43 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APH1BQ8WW43 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
APH1BQ8WW43 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.81■□□□□ 0.6
APH1BQ8WW43 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
APH1BQ8WW43 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APH1BQ8WW43 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.81■□□□□ 0.6
APH1BQ8WW43 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APH1BQ8WW43 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
APH1BQ8WW43 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APH1BQ8WW43 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.81■□□□□ 0.6
APH1BQ8WW43 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
APH1BQ8WW43 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APH1BQ8WW43 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APH1BQ8WW43 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.8■□□□□ 0.6
APH1BQ8WW43 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.8■□□□□ 0.6
APH1BQ8WW43 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APH1BQ8WW43 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APH1BQ8WW43 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APH1BQ8WW43 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APH1BQ8WW43 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APH1BQ8WW43 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.8■□□□□ 0.6
APH1BQ8WW43 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.8■□□□□ 0.6
APH1BQ8WW43 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms