Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.08■□□□□ 0.97
PTCD2Q8WV60 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTCD2Q8WV60 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PTCD2Q8WV60 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.08■□□□□ 0.97
PTCD2Q8WV60 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.08■□□□□ 0.97
PTCD2Q8WV60 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.08■□□□□ 0.97
PTCD2Q8WV60 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PTCD2Q8WV60 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PTCD2Q8WV60 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTCD2Q8WV60 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTCD2Q8WV60 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.08■□□□□ 0.96
PTCD2Q8WV60 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.07■□□□□ 0.96
PTCD2Q8WV60 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCD2Q8WV60 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PTCD2Q8WV60 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.07■□□□□ 0.96
PTCD2Q8WV60 AC090192.1-201ENST00000517740 490 ntBASIC21.07■□□□□ 0.96
PTCD2Q8WV60 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
PTCD2Q8WV60 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTCD2Q8WV60 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PTCD2Q8WV60 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
PTCD2Q8WV60 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTCD2Q8WV60 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTCD2Q8WV60 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 KRT19P1-201ENST00000405746 1186 ntBASIC21.04■□□□□ 0.96
PTCD2Q8WV60 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PTCD2Q8WV60 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 AC016769.1-201ENST00000409132 1010 ntBASIC21.03■□□□□ 0.96
PTCD2Q8WV60 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PTCD2Q8WV60 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms