Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 AC092118.2-201ENST00000613495 667 ntBASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 AC010980.2-201ENST00000587099 1412 ntBASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF2Q8TEC5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 AC245052.3-201ENST00000450182 901 ntBASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.67■■□□□ 1.06
SH3RF2Q8TEC5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF2Q8TEC5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF2Q8TEC5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SH3RF2Q8TEC5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SH3RF2Q8TEC5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SH3RF2Q8TEC5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SH3RF2Q8TEC5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SH3RF2Q8TEC5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 AC091799.1-201ENST00000422823 811 ntBASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 RNA5SP413-201ENST00000516373 109 ntBASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms