Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 AC092068.2-201ENST00000590491 1708 ntBASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 AC092865.7-201ENST00000641832 219 ntBASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 KRT8P9-201ENST00000558927 1449 ntBASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.25□□□□□ -0.13
ALMS1Q8TCU4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 KRT17P2-201ENST00000300992 1314 ntBASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 AC133681.1-201ENST00000465482 601 ntBASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 AL135905.2-201ENST00000584934 1404 ntBASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 AC113347.1-201ENST00000413321 391 ntBASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 LINC01124-201ENST00000409786 2117 ntBASIC14.24□□□□□ -0.13
ALMS1Q8TCU4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 KRASP1-201ENST00000407852 552 ntBASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ALMS1Q8TCU4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ALMS1Q8TCU4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 AC091799.1-201ENST00000422823 811 ntBASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms