Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 GUSBP5-201ENST00000418136 578 ntBASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 TSPY9P-201ENST00000440215 945 ntBASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 TSPY11P-201ENST00000442607 1045 ntBASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IL1Q8TBN0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 AC099791.2-201ENST00000605725 427 ntBASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 AP006587.3-201ENST00000525742 1516 ntBASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB3IL1Q8TBN0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
RAB3IL1Q8TBN0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IL1Q8TBN0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 AC239859.2-201ENST00000444165 318 ntBASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RAB3IL1Q8TBN0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB3IL1Q8TBN0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 AC007952.6-201ENST00000573168 2673 ntBASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 AC003957.1-201ENST00000625108 2673 ntBASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RAB3IL1Q8TBN0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms