Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHKBP1Q8TBC3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 RARRES2P4-201ENST00000514074 484 ntBASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SHKBP1Q8TBC3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 AC026471.6-201ENST00000622954 1905 ntBASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 AC010980.2-201ENST00000587099 1412 ntBASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 AC083880.1-201ENST00000608266 535 ntBASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 AC066615.1-201ENST00000640911 628 ntBASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 AC127496.7-201ENST00000625110 1798 ntBASIC21.92■■□□□ 1.1
SHKBP1Q8TBC3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.91■■□□□ 1.1
SHKBP1Q8TBC3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.91■■□□□ 1.1
SHKBP1Q8TBC3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.91■■□□□ 1.1
SHKBP1Q8TBC3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.91■■□□□ 1.1
SHKBP1Q8TBC3 MYC-209ENST00000641252 345 ntBASIC21.91■■□□□ 1.1
SHKBP1Q8TBC3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHKBP1Q8TBC3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHKBP1Q8TBC3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 POU5F1P3-201ENST00000428824 1078 ntBASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHKBP1Q8TBC3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SHKBP1Q8TBC3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SHKBP1Q8TBC3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.89■■□□□ 1.1
SHKBP1Q8TBC3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHKBP1Q8TBC3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.89■■□□□ 1.1
SHKBP1Q8TBC3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 ECEL1P1-201ENST00000373592 1742 ntBASIC21.89■■□□□ 1.09
SHKBP1Q8TBC3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.88■■□□□ 1.09
SHKBP1Q8TBC3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms