Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.81■■□□□ 1.56
NKX2-3Q8TAU0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC24.8■■□□□ 1.56
NKX2-3Q8TAU0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NKX2-3Q8TAU0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NKX2-3Q8TAU0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.8■■□□□ 1.56
NKX2-3Q8TAU0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NKX2-3Q8TAU0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
NKX2-3Q8TAU0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.8■■□□□ 1.56
NKX2-3Q8TAU0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.8■■□□□ 1.56
NKX2-3Q8TAU0 MYCNOS-205ENST00000641950 531 ntBASIC24.8■■□□□ 1.56
NKX2-3Q8TAU0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NKX2-3Q8TAU0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 DUX4L16-201ENST00000555130 1264 ntBASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 AP006294.2-201ENST00000641667 209 ntBASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NKX2-3Q8TAU0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NKX2-3Q8TAU0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 AL024507.2-201ENST00000606070 2574 ntBASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.77■■□□□ 1.56
NKX2-3Q8TAU0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
NKX2-3Q8TAU0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
NKX2-3Q8TAU0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
NKX2-3Q8TAU0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
NKX2-3Q8TAU0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.76■■□□□ 1.55
NKX2-3Q8TAU0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
NKX2-3Q8TAU0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.76■■□□□ 1.55
NKX2-3Q8TAU0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.76■■□□□ 1.55
NKX2-3Q8TAU0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.76■■□□□ 1.55
NKX2-3Q8TAU0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 CNN2P6-201ENST00000439038 900 ntBASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
NKX2-3Q8TAU0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 AF201337.1-201ENST00000520239 748 ntBASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NKX2-3Q8TAU0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NKX2-3Q8TAU0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NKX2-3Q8TAU0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NKX2-3Q8TAU0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms