Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
LINC00116Q8NCU8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC26.66■■□□□ 1.86
LINC00116Q8NCU8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.66■■□□□ 1.86
LINC00116Q8NCU8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC26.66■■□□□ 1.86
LINC00116Q8NCU8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.66■■□□□ 1.86
LINC00116Q8NCU8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
LINC00116Q8NCU8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LINC00116Q8NCU8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
LINC00116Q8NCU8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
LINC00116Q8NCU8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.66■■□□□ 1.86
LINC00116Q8NCU8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 POM121L13P-201ENST00000422362 380 ntBASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.65■■□□□ 1.86
LINC00116Q8NCU8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 AC010331.1-201ENST00000611423 582 ntBASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
LINC00116Q8NCU8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.64■■□□□ 1.85
LINC00116Q8NCU8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
LINC00116Q8NCU8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
LINC00116Q8NCU8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
LINC00116Q8NCU8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.63■■□□□ 1.85
LINC00116Q8NCU8 AC092053.2-201ENST00000640557 1818 ntBASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 CYP21A1P-202ENST00000354927 1481 ntBASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 BX088651.1-201ENST00000540551 451 ntBASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.62■■□□□ 1.85
LINC00116Q8NCU8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 AC007322.3-201ENST00000426526 701 ntBASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 TSPY7P-201ENST00000431358 1114 ntBASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 LINC01023-201ENST00000606054 436 ntBASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.61■■□□□ 1.85
LINC00116Q8NCU8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LINC00116Q8NCU8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LINC00116Q8NCU8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LINC00116Q8NCU8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.6■■□□□ 1.85
LINC00116Q8NCU8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
LINC00116Q8NCU8 AC233702.5-201ENST00000584107 538 ntBASIC26.6■■□□□ 1.85
LINC00116Q8NCU8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.6■■□□□ 1.85
LINC00116Q8NCU8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.6■■□□□ 1.85
LINC00116Q8NCU8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms