Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71LQ8N9Z2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71LQ8N9Z2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC71LQ8N9Z2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71LQ8N9Z2 AP006587.3-201ENST00000525742 1516 ntBASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 PLK5-205ENST00000642079 1969 ntBASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC71LQ8N9Z2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 AC121338.2-201ENST00000622535 1744 ntBASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71LQ8N9Z2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC71LQ8N9Z2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71LQ8N9Z2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 AC010525.1-201ENST00000585559 441 ntBASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC71LQ8N9Z2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CCDC71LQ8N9Z2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms