Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
TRAM1L1Q8N609 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAM1L1Q8N609 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAM1L1Q8N609 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAM1L1Q8N609 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAM1L1Q8N609 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAM1L1Q8N609 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAM1L1Q8N609 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAM1L1Q8N609 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAM1L1Q8N609 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRAM1L1Q8N609 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.65■□□□□ 0.9
TRAM1L1Q8N609 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRAM1L1Q8N609 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 AC091799.1-201ENST00000422823 811 ntBASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 AL024507.2-201ENST00000606070 2574 ntBASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TRAM1L1Q8N609 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRAM1L1Q8N609 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAM1L1Q8N609 FEM1AP4-201ENST00000443167 1987 ntBASIC20.63■□□□□ 0.89
TRAM1L1Q8N609 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAM1L1Q8N609 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAM1L1Q8N609 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAM1L1Q8N609 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAM1L1Q8N609 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAM1L1Q8N609 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAM1L1Q8N609 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRAM1L1Q8N609 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 AC090192.1-201ENST00000517740 490 ntBASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAM1L1Q8N609 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 AL162412.1-201ENST00000567129 965 ntBASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 AL591742.1-201ENST00000604433 565 ntBASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAM1L1Q8N609 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms