Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39CQ8N584 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39CQ8N584 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39CQ8N584 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
TTC39CQ8N584 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.2■■□□□ 1.15
TTC39CQ8N584 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.2■■□□□ 1.14
TTC39CQ8N584 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39CQ8N584 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
TTC39CQ8N584 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.2■■□□□ 1.14
TTC39CQ8N584 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39CQ8N584 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39CQ8N584 AC007322.4-201ENST00000509611 723 ntBASIC22.2■■□□□ 1.14
TTC39CQ8N584 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.2■■□□□ 1.14
TTC39CQ8N584 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.2■■□□□ 1.14
TTC39CQ8N584 AC011767.1-201ENST00000617410 1153 ntBASIC22.2■■□□□ 1.14
TTC39CQ8N584 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.2■■□□□ 1.14
TTC39CQ8N584 AC013268.1-206ENST00000638368 961 ntBASIC22.2■■□□□ 1.14
TTC39CQ8N584 AC112229.1-201ENST00000639295 961 ntBASIC22.2■■□□□ 1.14
TTC39CQ8N584 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39CQ8N584 AL024507.2-201ENST00000606070 2574 ntBASIC22.2■■□□□ 1.14
TTC39CQ8N584 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39CQ8N584 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39CQ8N584 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39CQ8N584 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TTC39CQ8N584 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TTC39CQ8N584 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39CQ8N584 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39CQ8N584 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39CQ8N584 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39CQ8N584 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TTC39CQ8N584 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TTC39CQ8N584 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39CQ8N584 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TTC39CQ8N584 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39CQ8N584 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.18■■□□□ 1.14
TTC39CQ8N584 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39CQ8N584 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.18■■□□□ 1.14
TTC39CQ8N584 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.18■■□□□ 1.14
TTC39CQ8N584 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TTC39CQ8N584 AC092437.1-201ENST00000624794 1048 ntBASIC22.18■■□□□ 1.14
TTC39CQ8N584 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.18■■□□□ 1.14
TTC39CQ8N584 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TTC39CQ8N584 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39CQ8N584 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC39CQ8N584 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.17■■□□□ 1.14
TTC39CQ8N584 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
TTC39CQ8N584 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
TTC39CQ8N584 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
TTC39CQ8N584 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.17■■□□□ 1.14
TTC39CQ8N584 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 AL162412.1-201ENST00000567129 965 ntBASIC22.17■■□□□ 1.14
TTC39CQ8N584 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 AC231657.2-201ENST00000624556 255 ntBASIC22.17■■□□□ 1.14
TTC39CQ8N584 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
TTC39CQ8N584 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.17■■□□□ 1.14
TTC39CQ8N584 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC39CQ8N584 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC39CQ8N584 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TTC39CQ8N584 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC39CQ8N584 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.16■■□□□ 1.14
TTC39CQ8N584 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.16■■□□□ 1.14
TTC39CQ8N584 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
TTC39CQ8N584 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TTC39CQ8N584 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC39CQ8N584 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
TTC39CQ8N584 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.16■■□□□ 1.14
TTC39CQ8N584 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC39CQ8N584 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC39CQ8N584 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.15■■□□□ 1.14
TTC39CQ8N584 DUX4L16-201ENST00000555130 1264 ntBASIC22.15■■□□□ 1.14
TTC39CQ8N584 IKBKGP1-201ENST00000612193 1073 ntBASIC22.15■■□□□ 1.14
TTC39CQ8N584 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.15■■□□□ 1.14
TTC39CQ8N584 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TTC39CQ8N584 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.15■■□□□ 1.14
TTC39CQ8N584 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TTC39CQ8N584 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.14■■□□□ 1.14
TTC39CQ8N584 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
TTC39CQ8N584 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.14■■□□□ 1.14
TTC39CQ8N584 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms