Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC50Q8IVM0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC50Q8IVM0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.93■■□□□ 1.1
CCDC50Q8IVM0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC50Q8IVM0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC50Q8IVM0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CCDC50Q8IVM0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC50Q8IVM0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC50Q8IVM0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC50Q8IVM0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CCDC50Q8IVM0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 AF213884.3-201ENST00000563833 479 ntBASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 AC110285.6-201ENST00000617652 491 ntBASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 AL355001.2-201ENST00000620617 1191 ntBASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC50Q8IVM0 AC005224.4-201ENST00000583262 1652 ntBASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 AC055733.4-201ENST00000638462 1354 ntBASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC50Q8IVM0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 AC007952.6-201ENST00000573168 2673 ntBASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 AC003957.1-201ENST00000625108 2673 ntBASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 BX005040.4-201ENST00000637145 1518 ntBASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC50Q8IVM0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC50Q8IVM0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.89■■□□□ 1.1
CCDC50Q8IVM0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC50Q8IVM0 RASA4CP-201ENST00000424092 1398 ntBASIC21.89■■□□□ 1.1
CCDC50Q8IVM0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CCDC50Q8IVM0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
CCDC50Q8IVM0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC50Q8IVM0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 MIR572-201ENST00000384983 95 ntBASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 MIR939-201ENST00000401314 82 ntBASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.88■■□□□ 1.09
CCDC50Q8IVM0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms