Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD3Q8IVD9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 AC007952.6-201ENST00000573168 2673 ntBASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 AC003957.1-201ENST00000625108 2673 ntBASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 AL138724.1-201ENST00000606771 1088 ntBASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD3Q8IVD9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.64■□□□□ 0.9
NUDCD3Q8IVD9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.64■□□□□ 0.89
NUDCD3Q8IVD9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.64■□□□□ 0.89
NUDCD3Q8IVD9 SERBP1P1-201ENST00000396021 1160 ntBASIC20.64■□□□□ 0.89
NUDCD3Q8IVD9 SLC47A1P1-202ENST00000449666 945 ntBASIC20.64■□□□□ 0.89
NUDCD3Q8IVD9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUDCD3Q8IVD9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUDCD3Q8IVD9 AC007225.1-201ENST00000566331 1836 ntBASIC20.64■□□□□ 0.89
NUDCD3Q8IVD9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.64■□□□□ 0.89
NUDCD3Q8IVD9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUDCD3Q8IVD9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
NUDCD3Q8IVD9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 SYT6-210ENST00000641643 1587 ntBASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 AC020907.5-201ENST00000624372 1936 ntBASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 AFG3L1P-217ENST00000557444 2447 ntBASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NUDCD3Q8IVD9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD3Q8IVD9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 AL512631.2-201ENST00000604634 923 ntBASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 AC136469.2-201ENST00000623944 1028 ntBASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD3Q8IVD9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms