Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 KRT8P33-201ENST00000508125 1423 ntBASIC21.16■□□□□ 0.98
CROCCP2Q86T23 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CROCCP2Q86T23 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP2Q86T23 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP2Q86T23 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP2Q86T23 AL391422.3-201ENST00000603791 2761 ntBASIC21.15■□□□□ 0.98
CROCCP2Q86T23 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CROCCP2Q86T23 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP2Q86T23 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP2Q86T23 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP2Q86T23 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.15■□□□□ 0.98
CROCCP2Q86T23 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP2Q86T23 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP2Q86T23 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
CROCCP2Q86T23 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.14■□□□□ 0.98
CROCCP2Q86T23 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CROCCP2Q86T23 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.14■□□□□ 0.98
CROCCP2Q86T23 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 KRT125P-201ENST00000546827 989 ntBASIC21.14■□□□□ 0.97
CROCCP2Q86T23 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 AP006587.3-201ENST00000525742 1516 ntBASIC21.14■□□□□ 0.97
CROCCP2Q86T23 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CROCCP2Q86T23 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 SMG8-203ENST00000578922 2178 ntBASIC21.13■□□□□ 0.97
CROCCP2Q86T23 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 AC010997.5-201ENST00000609182 354 ntBASIC21.13■□□□□ 0.97
CROCCP2Q86T23 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CROCCP2Q86T23 BX323043.1-201ENST00000641006 1765 ntBASIC21.13■□□□□ 0.97
CROCCP2Q86T23 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CROCCP2Q86T23 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP2Q86T23 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.1■□□□□ 0.97
CROCCP2Q86T23 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CROCCP2Q86T23 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CROCCP2Q86T23 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CROCCP2Q86T23 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CROCCP2Q86T23 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.1■□□□□ 0.97
CROCCP2Q86T23 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms