Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 AC010542.4-201ENST00000563151 1910 ntBASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13BQ7Z7G8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 RPS2P55-201ENST00000397318 883 ntBASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 AC107956.1-201ENST00000494359 873 ntBASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 LSM12P1-201ENST00000411836 588 ntBASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 AC100791.3-201ENST00000617619 330 ntBASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 AC061975.6-201ENST00000579045 1553 ntBASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 PNMA6B-201ENST00000538162 1200 ntBASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 AC069544.1-201ENST00000609399 999 ntBASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13BQ7Z7G8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 AC139530.1-201ENST00000575312 1977 ntBASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.96□□□□□ -0.33
VPS13BQ7Z7G8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS13BQ7Z7G8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
VPS13BQ7Z7G8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS13BQ7Z7G8 RN7SL471P-201ENST00000580476 299 ntBASIC12.96□□□□□ -0.34
VPS13BQ7Z7G8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS13BQ7Z7G8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 AC053503.5-201ENST00000601508 636 ntBASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13BQ7Z7G8 POU5F1P4-201ENST00000413175 1085 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms