Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.69□□□□□ -0.22
SCXQ7RTU7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCXQ7RTU7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.69□□□□□ -0.22
SCXQ7RTU7 RAP2CP1-201ENST00000605103 478 ntBASIC13.69□□□□□ -0.22
SCXQ7RTU7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SCXQ7RTU7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCXQ7RTU7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCXQ7RTU7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
SCXQ7RTU7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SCXQ7RTU7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCXQ7RTU7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCXQ7RTU7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SCXQ7RTU7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SCXQ7RTU7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCXQ7RTU7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SCXQ7RTU7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SCXQ7RTU7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.69□□□□□ -0.22
SCXQ7RTU7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCXQ7RTU7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC13.68□□□□□ -0.22
SCXQ7RTU7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
SCXQ7RTU7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 LINC01960-201ENST00000563759 1884 ntBASIC13.68□□□□□ -0.22
SCXQ7RTU7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 AC009237.3-201ENST00000393279 1427 ntBASIC13.68□□□□□ -0.22
SCXQ7RTU7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SCXQ7RTU7 AC026185.1-201ENST00000445748 174 ntBASIC13.68□□□□□ -0.22
SCXQ7RTU7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.68□□□□□ -0.22
SCXQ7RTU7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.68□□□□□ -0.22
SCXQ7RTU7 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.68□□□□□ -0.22
SCXQ7RTU7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 ESRRAP2-201ENST00000418437 1549 ntBASIC13.68□□□□□ -0.22
SCXQ7RTU7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
SCXQ7RTU7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SCXQ7RTU7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SCXQ7RTU7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC13.68□□□□□ -0.22
SCXQ7RTU7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCXQ7RTU7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC13.68□□□□□ -0.22
SCXQ7RTU7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 KRT87P-202ENST00000534226 1464 ntBASIC13.67□□□□□ -0.22
SCXQ7RTU7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 AC006970.2-201ENST00000450065 779 ntBASIC13.67□□□□□ -0.22
SCXQ7RTU7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SCXQ7RTU7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCXQ7RTU7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms