Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL4Q6ZR62 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL4Q6ZR62 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 KRT18P20-201ENST00000548986 1279 ntBASIC19.46■□□□□ 0.71
RTL4Q6ZR62 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL4Q6ZR62 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 UBE2DNL-204ENST00000602536 740 ntBASIC19.45■□□□□ 0.7
RTL4Q6ZR62 AC011767.1-201ENST00000617410 1153 ntBASIC19.45■□□□□ 0.7
RTL4Q6ZR62 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL4Q6ZR62 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL4Q6ZR62 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms