Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN4Q6PJG9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 YBX1P1-201ENST00000445822 960 ntBASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN4Q6PJG9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN4Q6PJG9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 AC079140.4-201ENST00000507448 529 ntBASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 EEF1DP3-203ENST00000566025 782 ntBASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 TERF1P2-201ENST00000583350 1212 ntBASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN4Q6PJG9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 AC053503.5-201ENST00000601508 636 ntBASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRFN4Q6PJG9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms