Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.81■■□□□ 1.56
CTR9Q6PD62 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CTR9Q6PD62 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CTR9Q6PD62 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CTR9Q6PD62 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CTR9Q6PD62 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CTR9Q6PD62 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CTR9Q6PD62 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.81■■□□□ 1.56
CTR9Q6PD62 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.81■■□□□ 1.56
CTR9Q6PD62 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CTR9Q6PD62 AL591742.1-201ENST00000604433 565 ntBASIC24.81■■□□□ 1.56
CTR9Q6PD62 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CTR9Q6PD62 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CTR9Q6PD62 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.81■■□□□ 1.56
CTR9Q6PD62 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CTR9Q6PD62 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CTR9Q6PD62 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.81■■□□□ 1.56
CTR9Q6PD62 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.81■■□□□ 1.56
CTR9Q6PD62 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.8■■□□□ 1.56
CTR9Q6PD62 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTR9Q6PD62 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTR9Q6PD62 AF201337.1-201ENST00000520239 748 ntBASIC24.8■■□□□ 1.56
CTR9Q6PD62 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.8■■□□□ 1.56
CTR9Q6PD62 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.8■■□□□ 1.56
CTR9Q6PD62 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.8■■□□□ 1.56
CTR9Q6PD62 AC105036.2-201ENST00000569468 176 ntBASIC24.8■■□□□ 1.56
CTR9Q6PD62 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTR9Q6PD62 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTR9Q6PD62 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTR9Q6PD62 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.8■■□□□ 1.56
CTR9Q6PD62 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CTR9Q6PD62 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.79■■□□□ 1.56
CTR9Q6PD62 AC244015.2-201ENST00000616358 1861 ntBASIC24.79■■□□□ 1.56
CTR9Q6PD62 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CTR9Q6PD62 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CTR9Q6PD62 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
CTR9Q6PD62 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CTR9Q6PD62 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CTR9Q6PD62 AC245052.3-201ENST00000450182 901 ntBASIC24.79■■□□□ 1.56
CTR9Q6PD62 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CTR9Q6PD62 AC016405.3-201ENST00000607710 860 ntBASIC24.79■■□□□ 1.56
CTR9Q6PD62 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.79■■□□□ 1.56
CTR9Q6PD62 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTR9Q6PD62 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTR9Q6PD62 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTR9Q6PD62 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTR9Q6PD62 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CTR9Q6PD62 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTR9Q6PD62 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTR9Q6PD62 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.78■■□□□ 1.56
CTR9Q6PD62 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CTR9Q6PD62 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
CTR9Q6PD62 AL162412.1-201ENST00000567129 965 ntBASIC24.78■■□□□ 1.56
CTR9Q6PD62 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.78■■□□□ 1.56
CTR9Q6PD62 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CTR9Q6PD62 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CTR9Q6PD62 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTR9Q6PD62 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CTR9Q6PD62 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTR9Q6PD62 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.77■■□□□ 1.56
CTR9Q6PD62 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CTR9Q6PD62 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTR9Q6PD62 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.77■■□□□ 1.56
CTR9Q6PD62 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CTR9Q6PD62 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTR9Q6PD62 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.77■■□□□ 1.56
CTR9Q6PD62 AC093787.1-201ENST00000450396 207 ntBASIC24.77■■□□□ 1.56
CTR9Q6PD62 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.77■■□□□ 1.56
CTR9Q6PD62 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTR9Q6PD62 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTR9Q6PD62 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CTR9Q6PD62 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CTR9Q6PD62 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.76■■□□□ 1.55
CTR9Q6PD62 AL355802.2-201ENST00000402069 882 ntBASIC24.76■■□□□ 1.55
CTR9Q6PD62 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CTR9Q6PD62 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.76■■□□□ 1.55
CTR9Q6PD62 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.76■■□□□ 1.55
CTR9Q6PD62 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CTR9Q6PD62 OR10C1-204ENST00000622521 1039 ntBASIC24.76■■□□□ 1.55
CTR9Q6PD62 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.76■■□□□ 1.55
CTR9Q6PD62 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.76■■□□□ 1.55
CTR9Q6PD62 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
CTR9Q6PD62 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CTR9Q6PD62 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CTR9Q6PD62 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.75■■□□□ 1.55
CTR9Q6PD62 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.75■■□□□ 1.55
CTR9Q6PD62 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.75■■□□□ 1.55
CTR9Q6PD62 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.75■■□□□ 1.55
CTR9Q6PD62 AC142086.2-201ENST00000569753 217 ntBASIC24.75■■□□□ 1.55
CTR9Q6PD62 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CTR9Q6PD62 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.75■■□□□ 1.55
CTR9Q6PD62 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
CTR9Q6PD62 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CTR9Q6PD62 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CTR9Q6PD62 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
CTR9Q6PD62 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CTR9Q6PD62 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.74■■□□□ 1.55
CTR9Q6PD62 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CTR9Q6PD62 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.74■■□□□ 1.55
CTR9Q6PD62 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms